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Validation of CXCL10 as a biomarker of respiratory tract infections detectable by lateral flow immunoassay

Dayna Mikkelsen, Jennifer A. Aguiar, Julia Danieli, Prakriti Chhabra, Benjamin J-M Tremblay, Manjot S. Hunjan, Victoria Kirkness, Jodi Gilchrist, David Bulir, Marek Smieja, Sojin Lee, Nader Shaikh, Hamza Mbareche, Samira Mubareka, Kha Tram, Andrew C. Doxey, Jeremy Hirota
ERJ Open Research 2022 8: 66; DOI: 10.1183/23120541.LSC-2022.66
Dayna Mikkelsen
1Firestone Institute for Respiratory Health – Division of Respirology, Department of Medicine, McMaster University, Hamilton, Canada
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  • For correspondence: mikkeld@mcmaster.ca
Jennifer A. Aguiar
2Department of Biology, University of Waterloo, Waterloo, Canada
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Julia Danieli
2Department of Biology, University of Waterloo, Waterloo, Canada
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Prakriti Chhabra
2Department of Biology, University of Waterloo, Waterloo, Canada
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Benjamin J-M Tremblay
3Centre for Research in Agriculture Genomics, Barcelona, Spain
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Manjot S. Hunjan
2Department of Biology, University of Waterloo, Waterloo, Canada
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Victoria Kirkness
1Firestone Institute for Respiratory Health – Division of Respirology, Department of Medicine, McMaster University, Hamilton, Canada
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Jodi Gilchrist
4Hamilton Regional Laboratory Medicine Program, Hamilton, Canada
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David Bulir
5Department of Pathology and Molecular Medicine, McMaster University, Hamilton, Canada
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Marek Smieja
6Department of Pathology and Molecular Medicine, McMaster University,, Hamilton , Canada
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Sojin Lee
7University of Pittsburgh, Pittsburgh, United States
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Nader Shaikh
8Department of Pediatrics and Clinical and Translational Science, University of Pittsburgh,, Pittsburgh, United States
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Hamza Mbareche
9Sunnybrook Research Institute, Toronto, Canada
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Samira Mubareka
9Sunnybrook Research Institute, Toronto, Canada
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Kha Tram
10Cytodiagnostics, Burlington, Canada
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Andrew C. Doxey
2Department of Biology, University of Waterloo, Waterloo, Canada
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Jeremy Hirota
1Firestone Institute for Respiratory Health – Division of Respirology, Department of Medicine, McMaster University, Hamilton, Canada
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Abstract

Introduction: Biomarkers of respiratory tract infections historically focused on the etiological cause of infection, although much of the morbidity and mortality is driven by the host-pathological response.

Aim: Determine host biomarkers indicative of viral respiratory tract infections that are amenable to lateral flow immunoassay (LFIA) testing.

Methods: Datamining was performed on in-house and publicly available datasets from respiratory syncytial virus (RSV), rhinovirus, influenza A and SARS-CoV-2 infected patient nasopharyngeal swab samples and compared to healthy controls. CXCL10, CXCL11 and TNFSF10 gene expression levels were assessed and a correlation analysis was performed in relation to infection severity and time-course. Lastly, the signature was validated at the protein level in saliva as a prerequisite for development of a host-response LFIA.

Results: CXCL10 and CXCL11 upregulation was positively correlated with RSV when compared to control (p= 0.016, p= 0.006). No significant association was found with influenza A or rhinovirus for all three genes. CXCL10/CXCL11/TNFSF10 upregulation was positively correlated with SARS-CoV-2 infection when compared to control (p < 0.001). CXCL10 expression correlated with COVID-19 severity and had the lowest variance over infection time-course. CXCL10 was not detected at the protein level in healthy saliva but was elevated in saliva from COVID-19 patients. A CXCL10 LFIA was developed with a sensitivity of 2 ng/ml in a buffer and artificial saliva.

Conclusion: The findings validate the potential utility of examining host immune responses during viral respiratory tract infections by exploring CXCL10 as a biomarker detectable by LFIA.

  • Immunology
  • Biomarkers
  • Covid-19

Footnotes

Cite this article as ERJ Open Research 2022; 8: Suppl. 8, 66.

This article was presented at the 2022 ERS Lung Science Conference, in session “Poster Session 2”.

This is an ERS Lung Science Conference abstract. No full-text version is available. Further material to accompany this abstract may be available at www.ers-education.org (ERS member access only).

  • Copyright ©the authors 2022
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Validation of CXCL10 as a biomarker of respiratory tract infections detectable by lateral flow immunoassay
Dayna Mikkelsen, Jennifer A. Aguiar, Julia Danieli, Prakriti Chhabra, Benjamin J-M Tremblay, Manjot S. Hunjan, Victoria Kirkness, Jodi Gilchrist, David Bulir, Marek Smieja, Sojin Lee, Nader Shaikh, Hamza Mbareche, Samira Mubareka, Kha Tram, Andrew C. Doxey, Jeremy Hirota
ERJ Open Research Mar 2022, 8 (suppl 8) 66; DOI: 10.1183/23120541.LSC-2022.66

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Validation of CXCL10 as a biomarker of respiratory tract infections detectable by lateral flow immunoassay
Dayna Mikkelsen, Jennifer A. Aguiar, Julia Danieli, Prakriti Chhabra, Benjamin J-M Tremblay, Manjot S. Hunjan, Victoria Kirkness, Jodi Gilchrist, David Bulir, Marek Smieja, Sojin Lee, Nader Shaikh, Hamza Mbareche, Samira Mubareka, Kha Tram, Andrew C. Doxey, Jeremy Hirota
ERJ Open Research Mar 2022, 8 (suppl 8) 66; DOI: 10.1183/23120541.LSC-2022.66
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