Microbiological and demographic characteristics of the patients enrolled in the study
| Lab no. | Diagnosis year | Exclusion reason | Sex | Age years | Region of isolation | MDR/XDR-TB | STR | INH | RMP | EMB | PZA | AMI | CAP | ETI | MOX | OFL | LIN | KAN | CIC | PAS | Cluster no. |
| S199228 | 2014 | M | 42 | LTV | XDR | R | R | R | R | R | R | R | R | R | R | S | S | S | S | ||
| 2014 | No culture isolation | M | 43 | LTV | XDR | R | R | R | R | R | R | R | R | R | R | S | S | S | S | ||
| 2014 | Only LPA | M | 47 | LTV | MDR | NA | R | R | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | ||
| TB25429 | 2014 | M | 41 | LTV | MDR | R | R | R | R | R | S | S | R | S | S | S | S | S | S | 6 | |
| P1595 | 2014 | M | 37 | LTV | MDR | R | R | R | S | R | S | S | R | S | S | S | S | S | S | 1 | |
| P1279 | 2014 | F | 31 | LTV | MDR | R | R | R | R | R | S | S | R | S | S | S | R | S | S | ||
| S207797 | 2014 | M | 53 | LTV | MDR | R | R | R | S | R | S | S | R | S | S | S | S | S | S | 2 | |
| P1428 | 2014 | M | 48 | LTV | MDR | R | R | R | S | R | S | S | R | S | S | S | S | S | S | 1 | |
| P1378 | 2014 | M | 50 | LTV | XDR | R | R | R | R | R | S | S | R | R | R | S | R | S | S | 3 | |
| P163 | 2014 | M | 53 | LTV | XDR | R | R | R | R | R | R | S | R | R | R | S | R | S | S | 3 | |
| TB24818 | 2014 | F | 32 | LTV | MDR | R | R | R | R | S | S | S | S | S | S | S | S | S | S | 7 | |
| P291 | 2014 | M | 28 | LTV | MDR | R | R | R | R | S | S | S | S | S | S | S | S | S | S | ||
| TB25274 | 2014 | M | 37 | LTV | XDR | R | R | R | R | R | S | S | R | S | R | S | R | R | S | ||
| S211891 | 2014 | M | 36 | LTV | MDR | R | R | R | R | S | S | S | R | S | S | S | S | S | S | 7 | |
| P1599 | 2014 | M | 43 | LTV | MDR | R | R | R | R | S | S | S | S | S | S | S | S | S | S | 6 | |
| P187 | 2014 | M | 58 | LTV | MDR | R | R | R | R | R | S | S | R | S | S | S | S | S | S | 2 | |
| P88 | 2014 | M | 63 | North | MDR | R | R | R | S | S | S | S | S | S | S | S | S | S | S | 4 | |
| P423 | 2014 | F | 75 | North | MDR | R | R | R | S | S | S | S | S | S | S | S | S | S | S | 4 | |
| P292 | 2014 | F | 41 | North | MDR | R | R | R | S | S | S | S | S | S | S | S | S | S | S | 4 | |
| P1536 | 2014 | M | 23 | North | MDR | R | R | R | S | S | S | S | S | S | S | S | S | S | S | 4 | |
| P729 | 2014 | M | 47 | North | MDR | R | R | R | S | S | S | S | S | S | S | S | S | S | S | ||
| P356 | 2014 | M | 42 | North | MDR | S | R | R | S | S | S | S | S | S | S | S | S | S | S | ||
| P92 | 2014 | M | 59 | Centre | MDR | R | R | R | S | S | S | S | R | S | S | S | S | S | S | 2 | |
| P340 | 2014 | M | 48 | Centre | XDR | R | R | R | R | S | R | S | R | S | R | S | R | S | S | 3 | |
| 2015 | Only LPA | M | 31 | LTV | MDR | NA | R | R | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | ||
| P2624 | 2015 | M | 28 | LTV | MDR | R | R | R | R | S | S | S | R | S | S | S | S | S | S | 7 | |
| P1928 | 2015 | M | 61 | LTV | MDR | R | R | R | R | R | S | S | R | S | S | S | S | S | S | 1 | |
| P1229 | 2015 | M | 39 | LTV | XDR | R | R | R | R | R | R | R | R | R | R | S | R | S | S | 1 | |
| P1876 | 2015 | M | 55 | LTV | XDR | R | R | R | R | R | R | S | R | R | R | S | R | S | S | 3 | |
| P1926 | 2015 | M | 52 | LTV | XDR | R | R | R | R | R | R | R | R | R | R | S | R | S | S | 1 | |
| P2829 | 2015 | M | 44 | LTV | MDR | S | R | R | S | S | S | S | R | S | S | S | S | S | S | 1 | |
| P2184 | 2015 | M | 75 | LTV | MDR | R | R | R | R | R | R | R | R | S | S | S | R | S | S | 1 | |
| P1994 | 2015 | M | 41 | LTV | MDR | R | R | R | S | R | S | S | R | S | S | S | S | S | S | 2 | |
| P2058 | 2015 | M | 57 | LTV | MDR | R | R | R | S | R | S | S | R | S | S | S | S | S | S | ||
| TB24737 | 2015 | M | 44 | LTV | XDR | R | R | R | R | R | R | R | S | R | R | S | R | S | R | ||
| P1585 | 2015 | F | 42 | LTV | MDR | R | R | R | R | S | S | S | R | S | S | S | S | S | S | 3 | |
| P2354 | 2015 | F | 27 | LTV | MDR | R | R | R | R | R | R | R | S | S | S | S | R | S | S | ||
| P2471 | 2015 | M | 34 | LTV | MDR | R | R | R | R | S | S | S | R | S | S | S | S | S | S | 3 | |
| 2015 | Only LPA | F | 32 | LTV | MDR | NA | R | R | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | ||
| P884 | 2015 | M | 61 | LTV | MDR | R | R | R | S | R | S | S | R | S | S | S | S | S | S | 2 | |
| P2579 | 2015 | M | 35 | LTV | MDR | R | R | R | R | R | S | S | R | S | S | S | S | S | S | ||
| P2452 | 2015 | M | 57 | North | MDR | R | R | R | S | S | S | S | R | S | S | S | S | S | S | 3 | |
| P982 | 2015 | M | 37 | North | MDR | R | R | R | R | R | S | S | S | S | S | S | S | S | S | ||
| P1880 | 2015 | M | 58 | North | MDR | R | R | R | S | S | S | S | S | S | S | S | R | S | S | ||
| P2353 | 2015 | M | 21 | Island of Madeira | MDR | S | R | R | R | S | S | S | R | S | S | S | S | S | S | 5 | |
| P27 | 2015 | M | 44 | Algarve | MDR | S | R | R | S | S | S | S | R | S | S | S | S | S | S | ||
| 2015 | Only LPA | M | 39 | Alentejo | MDR | NA | R | R | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | ||
| S308144 | 2016 | M | 41 | LTV | XDR | R | R | R | R | R | R | S | R | R | R | S | R | S | S | 3 | |
| S309968 | 2016 | F | 41 | North | MDR | R | R | R | S | S | S | S | S | S | S | S | S | S | S | 4 | |
| S310368 | 2016 | M | 42 | North | XDR | R | R | R | R | R | R | S | R | R | R | S | R | S | S | 3 | |
| S312205 | 2016 | F | 63 | LTV | MDR | S | R | R | S | R | R | R | R | S | S | S | R | S | S | 1 | |
| S314371 | 2016 | M | 15 | LTV | MDR | R | R | R | R | S | S | S | R | S | S | S | S | S | S | 6 | |
| S324134 | 2016 | M | 61 | Centre | MDR | R | R | R | R | R | S | S | S | S | S | S | R | S | S | ||
| 2016 | No culture isolation | F | 45 | LTV | MDR | R | R | R | R | R | NA | NA | NA | NA | NA | NA | NA | NA | NA | ||
| S326551 | 2016 | M | 40 | LTV | MDR | R | R | R | R | R | S | S | S | S | S | S | S | S | S | ||
| S327889 | 2016 | F | 22 | LTV | XDR | R | R | R | R | R | R | S | R | R | R | S | R | S | S | 3 | |
| S320857 | 2016 | M | 43 | LTV | MDR | R | R | R | R | R | S | S | S | S | S | S | S | S | S | ||
| S316569 | 2016 | M | 54 | North | MDR | R | R | R | S | S | R | R | S | S | S | S | R | S | S | ||
| S326782 | 2016 | M | 62 | North | MDR | R | R | R | S | S | S | S | R | S | S | S | S | S | S | 3 | |
| S340248 | 2016 | M | 20 | LTV | MDR | R | R | R | S | R | S | S | R | S | S | S | S | S | S | 2 | |
| TB31393 | 2016 | F | 40 | LTV | MDR | R | R | R | S | S | S | S | S | S | S | S | S | S | S | ||
| S332846 | 2016 | M | 70 | Centre | MDR | R | R | R | S | R | S | S | S | S | S | S | S | S | S | ||
| S347401 | 2016 | F | 20 | LTV | MDR | R | R | R | R | S | S | S | R | S | S | S | S | S | S | ||
| ACC | 2016 | F | 40 | LTV | MDR | R | R | R | S | R | S | S | R | S | S | S | S | S | S | 2 | |
| S333605 | 2016 | M | 62 | North | MDR | R | R | R | S | S | S | S | R | S | S | S | S | S | S | 3 | |
| S348387 | 2016 | M | UNK | Centre | MDR | S | R | R | S | S | S | S | S | S | S | S | S | S | S | ||
| S352139 | 2017 | F | 22 | Centre | MDR | R | R | R | R | R | S | S | S | S | S | S | S | S | S | 6 | |
| S375001 | 2017 | F | 22 | Centre | MDR | S | R | R | R | S | S | S | R | S | S | S | S | S | S | 5 | |
| S374686 | 2017 | F | 34 | LTV | MDR | S | R | R | R | R | S | S | R | S | S | S | S | S | S | ||
| S381277 | 2017 | M | 30 | North | MDR | R | R | R | R | S | S | S | S | S | S | S | S | S | S | ||
| TB33470 | 2017 | M | 52 | LTV | MDR | S | R | R | R | R | S | S | R | S | S | S | S | S | S | 1 | |
| S389865 | 2017 | F | 59 | North | MDR | R | R | R | R | R | S | S | S | S | S | S | S | S | S | ||
| S387683 | 2017 | M | 56 | LTV | XDR | R | R | R | R | R | R | S | R | R | R | S | R | S | S | 3 | |
| S399045 | 2017 | F | 41 | North | MDR | R | R | R | S | S | S | S | R | R | R | S | S | S | S | ||
| S396397 | 2017 | M | 51 | LTV | XDR | R | R | R | R | R | R | R | R | S | S | S | R | S | S | 1 | |
| S399986 | 2017 | M | 58 | LTV | MDR | R | R | R | R | S | S | S | R | R | R | S | S | S | S | 3 | |
| TB34192 | 2017 | M | 62 | LTV | MDR | R | R | R | S | S | S | S | R | S | S | S | S | S | S | 2 | |
| 2017 | Only LPA | M | 54 | North | MDR | NA | R | R | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA |
MDR: multidrug-resistant; XDR: extensively drug-resistant; TB: tuberculosis; STR: streptomycin; INH: isoniazid; RMP: rifampicin; EMB: ethambutol; PZA: pyrazinamide; AMI: amikacin; CAP: capreomycin; ETI: ethionamide; MOX: moxifloxacin; OFL: ofloxacin; LIN: linezolid; KAN: kanamycin; CIC: cycloserine; PAS: para-aminosalicylic acid; M: male; F: female; LTV: Lisbon and Tagus Valley; R: resistant; S: sensitive; NA: not available; LPA: line-probe assay; UNK: unknown.