Patient ID | Sample | Visit 1 | Visit 2 | Visit 3 | Visit 4 | Visit 5 | No. samples |
PO1 | Nasal lavage | n | n | SAU | SAU, PAE | - | 4 |
Sputum | PAE | SAU | SAU, PAE | SAU, PAE | - | 4 | |
Saliva | n | SAU, PAE | - | - | - | 2 | |
Toothbrush | n | PAE | PAE | - | - | 3 | |
PO2 | Nasal lavage | n | n | SAU | - | - | 3 |
Sputum | n | SAU | n | - | - | 3 | |
Saliva | - | - | - | - | - | 0 | |
Toothbrush | - | - | - | - | - | 0 | |
PO3 | Nasal lavage | n | n | - | - | - | 2 |
Sputum | PAE | PAE | - | - | 2 | ||
Saliva | n | n | - | - | - | 2 | |
Toothbrush | n | n | - | - | - | 2 | |
PO4 | Nasal lavage | n | n | n | - | - | 3 |
Sputum | SAU | SAU, SMA | SAU, SEM | - | - | 3 | |
Saliva | SAU, SEM | SAU, SEM | - | - | - | 2 | |
Toothbrush | SEM | SEM | - | - | - | 2 | |
PO5 | Nasal lavage | SAU | SAU | SAU | - | - | 3 |
Sputum | SAU, PAE | SAU, PAE | SAU | - | - | 3 | |
Saliva | SAU, PAE | SAU, SMA | - | - | - | 2 | |
Toothbrush | SAU, PAE | n | - | - | - | 2 | |
PO6 | Nasal lavage | PAE | n | n | PAE | - | 4 |
Sputum | n | n | PAE | n | - | 4 | |
Saliva | - | - | - | - | - | 0 | |
Toothbrush | - | - | - | - | - | 0 | |
PO7 | Nasal lavage | PAE | n | n | - | - | 3 |
Sputum | PAE, SEM, SMA | PAE, SEM | PAE, SEM | - | - | 3 | |
Saliva | - | - | - | - | - | 0 | |
Toothbrush | - | - | - | - | - | 0 | |
PO8 | Nasal lavage | n | SAU | n | SAU | SAU | 5 |
Sputum | SAU | SAU, SEM | SAU | SAU, SMA | SAU | 5 | |
Saliva | SAU, SMA | SAU | SAU | - | - | 3 | |
Toothbrush | SMA | SAU | SEM | - | - | 3 | |
PO9 | Nasal lavage | n | SAU, PAE | PAE | - | - | 3 |
Sputum | n | SAU | SAU, PAE | - | - | 3 | |
Saliva | SAU | SAU | - | - | - | 2 | |
Toothbrush | n | n | - | - | - | 2 | |
PO10 | Nasal lavage | AXY, PAE | AXY | AXY | - | - | 3 |
Sputum | AXY | AXY | AXY | - | - | 3 | |
Saliva | AXY | AXY | - | - | - | 2 | |
Toothbrush | n | n | - | - | - | 2 |
PAE: Pseudomonas aeruginosa; SAU: Staphylococcus aureus; SMA: Stenotrophomonas maltophilia; AXY: Achromobacter xylosoxidans; SEM: Serratia marcescens; n: no isolation of the investigated species; –: sample not available. Number of samples for each patient is also indicated. Patients with no saliva samples nor toothbrushes were not included in the collection of these samples.