TABLE 1

SLC34A2 variants reported in pulmonary alveolar microlithiasis

LocationcDNAConsequenceNumber of patientsReference
Homozygous allele state
 Exon 1c.-6773_-6588delNA6Corut et al. 2006 [19]
 Exon 2–6∼5.5 kb deletionNA1Ishihara et al. 2009 [20]
 Exon 3c.114delAFrameshift2Corut et al. 2006 [19]
 Exon 3c.212_224delFrameshift1Vismara et al. 2015 [21]
 Exon 3c.226C>TNonsense6Corut et al. 2006 [19]
Cakir et al. 2015 [22]
Mehta et al. 2016 [23]
 Exon 4c.316G>CSubstitution2Corut et al. 2006 [19]
Ozbudak et al. 2012 [24]
 Exon 5c.380-345_ c.523+659delNA2Dandan et al. 2018 [25]
 Intron 5–Exon 6c.524-18_559delNA1Simon et al. 2018 [26]
 Exon 6c.560G>ASubstitution1Jönsson et al. 2020 [18]
 Exon 6c.575C>ASubstitution3Ma et al. 2014 [27]
 Exon 6c.593T>CSubstitution3Gaber et al. 2012 [28]
 Exon 7c.646G>TNonsense1Jönsson et al. 2020 [18]
 Exon 8c.857_871delins19Frameshift2Huqun et al. 2007 [16]
 Exon 8c.893_897delTTGTCFrameshift1Alastal 2017 [29]
 Exon 8c.906G>ANonsense1Jönsson et al. 2020 [18]
 Exon 8c.910A>TNonsense6Yin et al. 2013 [30]
Zhong et al. 2009 [31]
Zhang et al. 2017 [32]
 Intron 9c.1048+1G>A#NA4Huqun et al. 2007 [16]
 Exon 10c.1136G>ASubstitution1Jönsson et al. 2020 [18]
 Exon 11c.1238G>ANonsense1Jönsson et al. 2020 [18]
 Exon 11c.1327delCNonsense2Jönsson et al. 2020 [18]
 Exon 11c.1328delTFrameshift1Corut et al. 2006 [19]
 Intron 11c.1333+1G>ANA1Jönsson et al. 2020 [18]
 Exon 12c.1342delGNonsense1Corut et al. 2006 [19]
 Exon 12c.1342_1361delFrameshift1–2Ellison et al. 2009 [7]
Sigur et al. 2019 [33]
 Exon 12c.1390G>CSubstitution2Jönsson et al. 2020 [18]
 Exon 12c.1402_1404delACCIn-frame deletion3Jönsson et al. 2012 [18]
Jönsson et al. 2020 [34]
 Exon 12c.1456C>TNonsense1Proesmans et al. 2012 [35]
 Exon 1–13Whole gene deletionNA1Stokman et al. 2016 [36]
Compound heterozygous allele state
 Exon 4c.316G>ASubstitution1Jönsson et al. 2020 [18]
 Exon 11c.1238G>ANonsense
 Exon 8c.910A>TNonsense1Wang et al. 2014 [37]
 Exon 12c.1363T>CSubstitution
 Intron 9c.1048+1G>ANA1Izumi et al. 2017 [38]
 Exon 12c.1390G>CSubstitution

NA: not applicable. #: Originally reported as IVS8+1G>A. SLC34A2 DNA reference sequence: Ensembl Transcript ID ENST00000382051.7 (GRCh38.p12 assembly).