Bronchoalveolar lavage culture results for bacterial, fungal and viral pathogens in the infection cohort
| Bacterial | 22 (51) |
| Achromobacter xylosoxidans | 2 |
| Pseudomonas aeruginosa | 7 |
| Serratia marcescens | 2 |
| Escherichia coli | 2 |
| Staphylococcus spp. | 5 |
| Stenotrophomonas maltophilia | 2 |
| Klebsiella pneumoniae | 2 |
| Fungal | 11 (26) |
| Aspergillus spp. | 7 |
| Scedosporium spp. | 4 |
| Viral | 10 (23) |
| Respiratory syncytial virus | 3 |
| Cytomegalovirus | 5 |
| Rhinovirus | 2 |
Data are presented as n (%) or n.