User profiles for Jonathan Jou

Jonathan D Jou

Duke University
Verified email at cs.duke.edu
Cited by 378

[HTML][HTML] Longitudinal lung function and gas transfer in individuals with idiopathic pulmonary fibrosis: a genome-wide association study

…, CA Melbourne, SF Ma, J Jou… - The Lancet …, 2023 - thelancet.com
Background Idiopathic pulmonary fibrosis (IPF) is an incurable lung disease characterised by
progressive scarring leading to alveolar stiffness, reduced lung capacity, and impeded gas …

The epithelial sodium channel δ-subunit: new notes for an old song

T Giraldez, P Rojas, J Jou, C Flores… - American Journal …, 2012 - journals.physiology.org
Amiloride-sensitive epithelial Na + channels (ENaCs) can be formed by different combinations
of four homologous subunits, named α, β, γ, and δ. In addition to providing an apical entry …

OSPREY 3.0: Open‐source protein redesign for you, with powerful new features

…, JW Martin, A Ojewole, JD Jou… - Journal of …, 2018 - Wiley Online Library
We present osprey 3.0, a new and greatly improved release of the osprey protein design
software. Osprey 3.0 features a convenient new Python interface, which greatly improves its …

Sepsis-associated acute respiratory distress syndrome in individuals of European ancestry: a genome-wide association study

…, A Corrales, MI García-Laorden, J Jou… - The Lancet …, 2020 - thelancet.com
Background Acute respiratory distress syndrome (ARDS) is a lung inflammatory process
caused mainly by sepsis. Most previous studies that identified genetic risks for ARDS focused …

Production of haploid zebrafish embryos by in vitro fertilization

…, SJ Poureetezadi, R McKee, J Jou… - JoVE (Journal of …, 2014 - jove.com
The zebrafish has become a mainstream vertebrate model that is relevant for many disciplines
of scientific study. Zebrafish are especially well suited for forward genetic analysis of …

PCSK6 and survival in idiopathic pulmonary fibrosis

…, AL Linderholm, V Vo, ME Strek, J Jou… - American Journal of …, 2023 - atsjournals.org
Rationale: Idiopathic pulmonary fibrosis (IPF) is a devastating disease characterized by
limited treatment options and high mortality. A better understanding of the molecular drivers of …

[HTML][HTML] Temporal and spatial expression of tight junction genes during zebrafish pronephros development

R McKee, GF Gerlach, J Jou, CN Cheng… - Gene Expression …, 2014 - Elsevier
The kidney is comprised of nephrons – epithelial tubes with specialized segments that
reabsorb and secrete solutes, perform osmoregulation, and produce urine. Different nephron …

[HTML][HTML] Novel idiopathic pulmonary fibrosis susceptibility variants revealed by deep sequencing

JM Lorenzo-Salazar, SF Ma, J Jou, PC Hou… - ERJ open …, 2019 - Eur Respiratory Soc
Background Specific common and rare single nucleotide variants (SNVs) increase the
likelihood of developing sporadic idiopathic pulmonary fibrosis (IPF). We performed target-…

BBK* (Branch and Bound Over K*): A Provable and Efficient Ensemble-Based Protein Design Algorithm to Optimize Stability and Binding Affinity Over Large …

AA Ojewole, JD Jou, VG Fowler… - Journal of Computational …, 2018 - liebertpub.com
Computational protein design (CPD) algorithms that compute binding affinity, K a , search for
sequences with an energetically favorable free energy of binding. Recent work shows that …

Evaluation of a whole‐exome sequencing pipeline and benchmarking of causal germline variant prioritizers

…, H Rodriguez‐Perez, J Jou… - Human …, 2022 - Wiley Online Library
Most causal variants of Mendelian diseases are exonic. Whole‐exome sequencing (WES)
has become the diagnostic gold standard, but causative variant prioritization constitutes a …